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Table 4 Atoms used in the calculation of the contact measure

From: An effective all-atom potential for proteins

Residue Set of atoms (A I )
Pro C β , C γ , C δ
Tyr C γ , Cδ1, Cδ2, Cϵ1, Cϵ2, C ζ
Val C β , Cγ1, Cγ2
Ile C β , Cγ1, Cγ2, C δ
Leu C β , C γ , Cδ1, Cδ2
Met C β , C γ , S δ , C ϵ
Phe C γ , Cδ1, Cδ2, Cϵ1, Cϵ2, C ζ
Trp C γ , Cδ1, Cδ2, Cϵ3, Cζ3, Cη2
Arg C β , C γ
Lys C β , C γ , C δ