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Table 1 Amino acid sequences

From: An effective all-atom potential for proteins

System

PDB code

Sequence

Trp-cage

1L2Y

NLYIQ WLKDG GPSSG RPPPS

E6apn1

1RIJ

Ac-ALQEL LGQWL KDGGP SSGRP PPS-NH2

C

 

Ac-KETAA AKFER AHA-NH2

EK

 

Ac-YAEAA KAAEA AKAF-NH2

Fs

 

Suc-AAAAA AAARA AAARA AAARA A-NH2

GCN4tp

2OVN

NYHLE NEVAR LKKLV GE

HPLC-6

1WFA

DTASD AAAAA ALTAA NAKAA AELTA ANAAA AAAAT AR-NH2

Chignolin

1UAO

GYDPE TGTWG

MBH12

1J4M

RGKWT YNGIT YEGR

GB1p

 

GEWTY DDATK TFTVT E

GB1m2

 

GEWTY NPATG KFTVT E

GB1m3

 

KKWTY NPATG KFTVQ E

trpzip1

1LE0

SWTWE GNKWT WK-NH2

trpzip2

1LE1

SWTWE NGKWT WK-NH2

betanova

 

RGWSV QNGKY TNNGK TTEGR

LLM

 

RGWSL QNGKY TLNGK TMEGR

beta3s

 

TWIQN GSTKW YQNGS TKIYT

AB zipper

1U2U

Ac-EVAQL EKEVA QLEAE NYQLE QEVAQ LEHEG-NH2

  

Ac-EVQAL KKRVQ ALKAR NYALK QKVQA LRHKG-NH2

Top7-CFR

2GJH

ERVRI SITAR TKKEA EKFAA ILIKV FAELG YNDIN VTWDG DTVTV EGQL

GS-α3 W

1LQ7

GSRVK ALEEK VKALE EKVKA LGGGG RIEEL KKKWE ELKKK IEELG GGGEV KKVEE EVKKL EEEIK KL

  1. Suc stands for succinylic acid.